D. Acquotti et al., GEOMETRICAL AND CONFORMATIONAL PROPERTIES OF GANGLIOSIDE GALNAC-G(D1A), IV(4)GALNACIV(3)NEU5ACII(3)NEU5ACGGOSE(4)CER, European journal of biochemistry, 225(1), 1994, pp. 271-288
The aggregative properties of GalNAc-G(D1a) ganglioside, in comparison
with those of G(D1a), have been investigated and correlated to the in
trinsic conformation and mobility of the oligosaccharide chain of the
molecules. Micellar parameters in aqueous solution (molecular mass, hy
drodynamic radius as well as the surface area at the lipid/water inter
face and the packing parameter of the monomer inserted in the aggregat
e) are measured by the laser light-scattering technique. The presence
of a further GalNAc residue causes a 22% increase in molecular mass, c
ontrary to expectation. Oligosaccharide moiety three-dimensional struc
tures have been modeled using molecular mechanics and dynamics calcula
tions, based on NOE interactions observed for native gangliosides diss
olved in deuterated dimethylsulfoxide or, as mixed micelles with fully
deuterated dodecylphosphocholine, in D2O. Compared with G(D1A) the Ga
lNAc-G(D1a) is less mobile, thus influencing the surface area, this lo
wer mobility together with the GalNAc-G(D1a) conformation leads to a l
arger number of monomers participating in the formation of the micelle
. The results further substantiate the model in which the three-dimens
ional structure and the intrinsic dynamic properties of the oligosacch
aride chain affect the geometrical properties of the aggregate.