TUMOUR-necrosis factor-alpha (TNF-alpha) is believed to have an import
ant role in the pathogenesis of severe infectious disease(1) and fatal
cerebral malaria is associated with high circulating levels of this c
ytokine(2,3). In a large case-control study in Cambian children we fin
d that homozygotes for the TNF2 allele, a variant of the TNF-alpha gen
e promoter region(4), have a relative risk of 7 for death or severe ne
urological sequelae due to cerebral malaria. Although the TNF2 allele
is in linkage disequilibrium with several neighbouring HLA alleles, we
show that this disease association is independent of HLA class I and
class II variation. These data suggest that regulatory polymorphisms o
f cytokine genes can affect the outcome of severe infection. The maint
enance of the TNF2 allele at a gene frequency of 0.16 in The Gambia im
plies that the increased risk of cerebral malaria in homozygotes is co
unterbalanced by some biological advantage.