S. Mallik et al., SYNTHETIC BIS-METAL ION RECEPTORS FOR BIS-IMIDAZOLE PROTEIN ANALOGS, Journal of the American Chemical Society, 116(20), 1994, pp. 8902-8911
We are investigating an approach to protein recognition that is based
on matching a pattern of metal ions in a synthetic receptor to a compl
ementary pattern of metal-coordinating functional groups (histidine) o
n a protein's surface. In this model study, target ''protein analogs''
were constructed by linking two imidazoles via organic spacers of var
ying lengths. By computer modeling the individual targets and receptor
s, bis-Hg2+ receptors were designed to position two metal ions to matc
h the available nitrogen ligands of their target bis-imidazoles. While
H-1 NMR studies in DMSO-d(6) show that the receptors can bind 2 equiv
of 1-benzylimidazole (K-1 similar to 10(4) M(-1)), a bis-imidazole is
bound in a 1:1 complex with association constants as high as 3 x 10(6
) M(-1). Bis-metal ion receptors are indeed selective for their target
bis-imidazoles in competitive binding experiments, preferring the tar
get over others that are both longer and shorter by similar to 4 Angst
rom (maximum selectivity = 11.5). A maximum selectivity of 140 was obs
erved for the competition between a target bis-imidazole and 1-benzyli
midazole. Increasing the available coordination sites on the metal ion
significantly reduces selectivity, presumably by allowing the recepto
r to take on multiple bound conformations. Attempts to improve binding
selectivity by restricting the receptors' conformational mobility red
uced selectivity, primarily by introducing unanticipated unfavorable i
nteractions with the target bis-imidazoles.