The Samoan islands were politically separated into American Samoa and
Western Samoa in the early 1900s. Economic modernization is far more e
xtensive in American Samoa. However, the Samoan archipelago has mainta
ined a remarkable degree of sociocultural homogeneity, including inter
marriage. The sociocultural exchanges presumably led to genetic homoge
neity between the two Samoas. Detailed genetic comparisons and charact
erizations of Samoans are scanty, however. As part of a multidisciplin
ary study of modernization and cardiovascular risk factors in adults,
we analyzed nine hypervariable nuclear DNA (HVR) and four serum protei
n polymorphisms in the two Samoan groups. The average heterozygosities
at both DNA and serum protein loci are comparable in the two groups.
As expected, the HVR loci reveal a high degree of variability (heteroz
ygosity 30-87%) compared with the serum protein loci (heterozygosity 1
-52%). A large proportion of alleles at the HVR loci, ranging from 50%
to 100%, are shared between American acid Western Samoa. With the exc
eptions of the D1S80 locus in American Samoa and the D13S118 locus in
Western Samoa, the genotype distributions at all loci conform to their
respective Hardy-Weinberg expectations. Sporadic occurrence of the F1
3B2 allele at the F13B locus in Samoans indicates a low level of Euro
pean admixture because this allele is unique to Europeans. The calcula
ted zero values of kinship coefficients and standard genetic distances
indicate minimal population differentiation between the two Samoan gr
oups.