R. Bogumil et al., ELECTRON-PARAMAGNETIC-RESONANCE OF D-XYLOSE ISOMERASE - EVIDENCE FOR METAL-ION MOVEMENT INDUCED BY BINDING OF CYCLIC SUBSTRATES AND INHIBITORS, Biochemistry, 36(9), 1997, pp. 2345-2352
The interactions of substrates and inhibitors with the Mn2+ ions in th
e binuclear active center of D-xylose isomerase (XyII) were investigat
ed by EPR spectroscopy at X- and Q-band frequencies. The metal binding
site 1 (A site) was specifically occupied with Mn2+ ions by blocking
the high-affinity metal binding site 2 (B-site) either with Co2+ ions,
resulting in a catalytically active enzyme, or with Cd2+ Or Pb2+ ions
yielding an inactive enzyme species. Incubation of both the Co2+/Mn2- and the Cd2+/Mn2+-XyII with the acyclic inhibitor xylitol revealed E
PR spectra with well-resolved hyperfine patterns, but with increased z
ero field splitting (zfs) parameter D compared to the spectra without
inhibitor. D was estimated by spectral simulation of the central -1/2<
->1/2 fine structure transition. D values of 33 and 50 mT were obtaine
d for the Co2+/Mn2+-XyII and the Cd2+/Mn2+-XyII samples, respectively.
These results indicate direct interaction of the xylitol with the Mn2
+ in the A-site. More drastic changes are observed with the substrates
D-xylose and D-glucose. and with the cyclic inhibitors 5-thio-alpha-D
-glucose and 2-desoxy-D-glucose. For Cd2+/Mn2+-XyII, the EPR spectra w
ith substrates and cyclic inhibitors are similar to each other but dif
ferent from the spectra with the acylic inhibitor xylitol. They exhibi
t well-resolved line patterns with a relative large zero field splitti
ng, which was estimated to be in the range of D = 65-85 mT in the vari
ous complexes. Binding of substrates or of cyclic inhibitors to the Co
2+/Mn2+-XyII yields EPR spectra without resolved hyperfine interaction
s, indicative of dipolar interaction between the two paramagnetic meta
l ions. This can be explained with a decrease in the metal-metal dista
nce. Furthermore, the EPR data strongly suggest that the corresponding
metal ion movement is induced by binding of the cyclic conformation o
f either substrates or cyclic inhibitors and not by binding of the ext
ended form of the sugars.