SOLUTION STRUCTURE OF THE 30 KDA N-TERMINAL DOMAIN OF ENZYME-I OF THEESCHERICHIA-COLI PHOSPHOENOLPYRUVATE-SUGAR PHOSPHOTRANSFERASE SYSTEM BY MULTIDIMENSIONAL NMR
Ds. Garrett et al., SOLUTION STRUCTURE OF THE 30 KDA N-TERMINAL DOMAIN OF ENZYME-I OF THEESCHERICHIA-COLI PHOSPHOENOLPYRUVATE-SUGAR PHOSPHOTRANSFERASE SYSTEM BY MULTIDIMENSIONAL NMR, Biochemistry, 36(9), 1997, pp. 2517-2530
The three-dimensional solution structure of the 259-residue 30 kDa N-t
erminal domain of enzyme I (EIN) of the phosphoenolpyruvate:sugar phos
photransferase system of Escherichia coli has been determined by multi
dimensional nuclear magnetic resonance spectroscopy. Enzyme I, which i
s autophosphorylated by phosphoenolpyruvate, reversibly phosphorylates
the phosphocarrier protein HPr, which in turn phosphorylates a group
of membrane-associated proteins, known as enzymes II. To facilitate an
d confirm NH, N-15, and C-13 assignments, extensive use was made of pe
rdeuterated N-15- and N-15/C-13-labeled protein to narrow line widths.
Ninety-eight percent of the H-1, N-15, and C-13 assignments for the b
ackbone and first side chain. atoms of protonated EIN were obtained us
ing a combination of double and triple resonance correlation experimen
ts. The structure determination was based on a total of 4251 experimen
tal NMR restraints, and the precision of the coordinates for the final
50 simulated annealing structures is 0.79 +/- 0.18 Angstrom for the b
ackbone atoms and 1.06 +/- 0.15 Angstrom for all atoms. The structure
is ellipsoidal in shape, approximately 78 Angstrom long and 32 Angstro
m wide, and comprises two domains: an alpha/beta domain (residues 1-20
and 148-230) consisting of six strands and three helices and an alpha
-domain (residues 33-143) consisting of four helices. The two domains
are connected by two linkers (residues 21-32 and 144-147), and in addi
tion, at the C-terminus there is another helix which serves as a linke
r between the N- and C-terminal domains of intact enzyme I. A comparis
on with the recently solved X-ray structure of EIN [Liao, D.-I., Silve
rton, E., Seek, Y.-J., Lee, B. R., Peterkofsky, A., & Davies, D. R. (1
996) Structure 4, 861-872] indicates that there are no significant dif
ferences between the solution and crystal structures within the errors
of the coordinates. The active site His189 is located in a cleft at t
he junction of the a and alpha/beta domains and has a pK(a) of similar
to 6.3. His-189 has a trans conformation about chi(1), a g(+) conform
ation about chi(2), and its N epsilon 2 atom accepts a hydrogen bond f
rom the hydroxyl proton of Thr168. Since His189 is thought to be phosp
horylated at the N epsilon 2 position, its side chain conformation wou
ld have to change upon phosphorylation.