B. Nawrot et al., THE STRUCTURE OF 3'-O-ANTHRANILOYLADENOSINE, AN ANALOG OF THE 3'-END OF AMINOACYL-TRANSFER-RNA, Nucleic acids research, 25(5), 1997, pp. 948-954
3'-O-Anthraniloyladenosine, an analogue of the 3'-terminal aminoacylad
enosine residue in aminoacyl-tRNAs, was prepared by chemical synthesis
, and its crystal structure was determined, The sugar pucker of 3'-O-a
nthraniloyladenosine is 2'-endo resulting in a 3'-axial position of th
e anthraniloyl residue, The nucleoside is in syn conformation, which i
s stabilized by alternating stacking of adenine and benzoyl residues o
f the neighboring molecules in the crystal lattice, The conformation o
f the 5'-hydroxymethylene in 3'-O- anthraniloyladenosine is gauche-gau
che. There are two intramolecular and two intermolecular hydrogen bond
s and several H-bridges with surrounding water molecules, The predomin
ant structure of 3'-O-anthraniloyladenosine in solution, as determined
by NMR spectroscopy, is 2'-endo, gauche-gauche and anti for the sugar
ring pucker, the torsion angle around the C4'-C5' bond and the torsio
n angle around the C1'-N9 bond, respectively, The 2'-endo conformation
of the ribose in 2'(3')-O-aminoacyladenosine, which places the adenin
e and aminoacyl residues in equatorial and axial positions, respective
ly, could serve as a structural element that is recognized by enzymes
that interact with aminoacyl-tRNA or by ribosomes to differentiate bet
ween aminoacylated and non-aminoacylated tRNA.