Five yeast artificial chromosome (YAC) clones containing the human cas
ein gene family were isolated and characterized to study the control m
echanisms for the expression of these genes. Partial restriction analy
sis in conjunction with the chromosomal fragmentation method and fluor
escence in situ hybridization (FISH) analysis were performed to constr
uct a detailed physical map of the casein gene family and to determine
the chromosomal localization of these genes. The isolated YAC clones
748F3, 750D11, 882G11, 886B3 and 960D2 were 1.2 Mb, 860 kb, 800 kb 1.5
Mb and 1.5 Mb in size, respectively. The clones 748F3, 882G11, 886B3
and 960D2 contained the entire casein gene family, while the kappa-cas
ein gene was absent in 750D11. The human alpha S1-, beta- and kappa-ca
sein genes were found to be closely linked and arranged in the order a
lpha S1-beta-kappa. The distance between alpha S1 and beta, and betwee
n alpha S1 and kappa was approximately 10 and 300 kb, respectively. Th
e beta-casein gene was oriented in the apposite direction to the alpha
S1- and kappa-casein genes. The casein gene family was localized to c
hromosome 4q21.1 by FISH analysis.