Although retroviral integration requires specific viral DNA sequences,
factors which govern the choice of a chromosomal target site within a
n infected cell are less clear. For example, certain chromosomal regio
ns may be inaccessible to the viral integration machinery, while other
s may favor integration. A recent paper by Withers-Ward et al.((1)) ad
dresses this issue using a polymerase chain reaction-based assay capab
le of identifying single integration events within a large population
of infected cells. Their results show that integration can occur into
many different chromosomal regions, and that local DNA structure can i
nfluence the site of integration within a given region.