THE SOLUTION CONFORMATION OF SIALYL-ALPHA(2-]6)-LACTOSE STUDIED BY MODERN NMR TECHNIQUES AND MONTE-CARLO SIMULATIONS

Citation
L. Poppe et al., THE SOLUTION CONFORMATION OF SIALYL-ALPHA(2-]6)-LACTOSE STUDIED BY MODERN NMR TECHNIQUES AND MONTE-CARLO SIMULATIONS, Journal of biomolecular NMR, 2(2), 1992, pp. 109-136
Citations number
87
Journal title
ISSN journal
09252738
Volume
2
Issue
2
Year of publication
1992
Pages
109 - 136
Database
ISI
SICI code
0925-2738(1992)2:2<109:TSCOSS>2.0.ZU;2-3
Abstract
We present a comprehensive strategy for detailed characterization of t he solution conformations of oligosaccharides by NMR spectroscopy and force-field calculations. Our experimental strategy generates a number of interglycosidic spatial constraints that is sufficiently large to allow us to determine glycosidic linkage conformations with a precisio n heretofore unachievable. In addition to the commonly used {H-1,H-1} NOE contacts between aliphatic protons, our constraints are: (a) homon uclear NOEs of hydroxyl protons in H2O to other protons in the oligosa ccharide, (b) heteronuclear {H-1,C-13} NOEs, (c) isotope effects of (O H)-H-1/(OH)-H-2 hydroxyl groups on C-13 chemical shifts, and (d) long- range heteronuclear scalar couplings across glycosidic bonds. We have used this approach to study the trisaccharide sialyl-alpha(2 --> 6)-la ctose in aqueous solution. The experimentally determined geometrical c onstraints were compared to results obtained from force-field calculat ions based on Metropolis Monte Carlo simulations. The molecule was fou nd to exist in 2 families of conformers. The preferred conformations o f the alpha(2 --> 6)-linkage of the trisaccharide are best described b y an equilibrium of 2 conformers with PHI-angles at -60-degrees or 180 -degrees and of the 3 staggered rotamers of the OMEGA-angle with a pre dominant gt conformer. Three intramolecular hydrogen bonds, involving the hydroxyl protons on C8 and C7 of the sialic acid residue and on C3 of the reducing-end glucose residue, contribute significantly to the conformational stability of the trisaccharide in aqueous solution.