The role of cell lineage in the organization of the cerebral cortex an
d striatum of the developing rat forebrain was analysed using retrovir
al-mediated gene transfer to mark the progeny of individual progenitor
s. Injections around the onset of neurogenesis (embryonic day 14) prod
uced neuronal- and glial-specific clones in the striatum and cortex. T
he majority of the neuronal clones were restricted to either the deep
or superficial layers of the cortex and to either the striatal patch o
r matrix compartments of the striatum. Moreover, modeling the distribu
tions of the neuronal clones in various ways revealed that grouping th
e clones into deep vs superficial cortical compartments and patch vs m
atrix striatal compartments best accounted for the clone distributions
. These results suggest that at the onset of neurogenesis there is a h
eterogeneity of neuronal progenitors within the proliferative ventricu
lar zone.