The region between the zebrafish homeobox genes hox-B5 and hox-B6 was
sequenced, and searched for consensus binding sites of retinoic acid r
eceptors and other transcription factors. A continuous sequence of 7.2
kb covering the zebrafish hox-B5/B6 genes was then compared to the co
rresponding region of the mouse Hox-B complex. Except for the open rea
ding frames, the only highly conserved regions that could be found wer
e stretches extending 0.3 kb upstream from the initiation codons. With
in the conserved upstream regions of hox-B5/B6, we identified a common
10 bp sequence, which is also present close to the initiation codons
of several other Hox genes and which therefore may be implicated in th
e control of their expression.