A. Low et al., NUCLEOTIDE-BINDING AND GTP HYDROLYSIS BY THE 21-KDA PRODUCT OF THE C-H-RAS GENE AS MONITORED BY PROTON-NMR SPECTROSCOPY, European journal of biochemistry, 213(2), 1993, pp. 781-788
Proton-NMR signals in the downfield region (below almost-equal-to 10 p
pm) have been shown to provide a useful spectroscopic window to monito
r the binding of guanine nucleotides to the active site of GTP/GDP-bin
ding proteins via H-bonds, as specified here by the 21-kDa product of
the c-H-ras gene (p21). The time course of the intensity change of cer
tain peaks upon addition of GTP to nucleotide-free p2l corresponds to
the GTP hydrolysis rate as determined by HPLC. Thou-h there are fewer
potential H-bond acceptors in the GDP-bound protein than in the GTP co
mplex, more downfield peaks are found in the former complex, suggestin
g tighter binding, of GDP. Moreover, inspection of the downfield proto
n-NMR spectra permits rapid detection of subtle changes of the active
site induced by complexation with slowly hydrolyzing GTP analogues res
ulting from mutations of the amino acid sequence, especially in the ph
osphate binding loop. Our studies strongly suggest that no major confo
rmational change of the phosphate-binding region occurs upon nucleotid
e complexation that precedes the catalytic step. Besides, it is suspec
ted that the Ser17 hydroxyl group is involved in nucleotide binding an
d GTP hydrolysis.