Two satellite DNAs, designated CapA and CapB, were isolated from the n
eotropical primate, Cebus apella. The satellites exhibit nonoverlappin
g distributions on C. apella chromosomes. CapA is a major component of
interstitial regions of constitutive heterochromatin, a very large bl
ock of heterochromatin comprising most of the long arm of chromosome 1
1, and some telomeres. The CapA monomer has a length of about 1500 bp
and appears recently to have undergone an amplification episode in the
C. apella genome. CapA-like sequences are probably present in members
of the family Cebidae (to which C. apella belongs), but not in member
s of the family Callitrichidae (marmosets). CapB sequences can be dete
cted at the centromeres of many C. apella chromosomes, and similar seq
uences are present in all neotropical primates. The 342 bp CapB monome
r shares 60%-64% sequence identity with several alpha satellite sequen
ces of human origin. Because of its structure, sequence, and location,
it appears that CapB is the New World primate homolog of Old World pr
imate alpha satellite DNA.