I. Singh et al., PHYTANIC ACID ALPHA-OXIDATION - DIFFERENTIAL SUBCELLULAR-LOCALIZATIONIN RAT AND HUMAN TISSUES AND ITS INHIBITION BY NYCODENZ, The Journal of biological chemistry, 268(14), 1993, pp. 9972-9979
The subcellular site of oxidation of [1-C-14]phytanic acid to pristani
c acid and CO2 was examined by measurement of the release of (CO2)-C-1
4 in different organelles from human and rat tissues prepared by isopy
cnic density gradient centrifugation in Nycodenz. The activity of phyt
anic acid oxidation in human tissues (liver and cultured skin fibrobla
sts) paralleled that of the peroxisomal marker catalase. We also obser
ved that Nycodenz (commonly used gradient material for isolation of su
bcellular organelles) has a strong inhibitory effect on the alpha-oxid
ation of phytanic acid. This inhibition is reversible and can be decre
ased or eliminated by dialysis of isolated organelles against isotonic
solution. The dialysis of endoplasmic reticulum, mitochondrial, and p
eroxisomal fractions from human liver and cultured skin fibroblasts fo
r 2 h against isotonic solution increased the specific activity of phy
tanic acid oxidation by 1.3-, 1.3-, and 5-21-fold, respectively, after
removal of Nycodenz as compared with nondialyzed samples. After dialy
sis, the rate of oxidation of phytanic acid in peroxisomes from human
liver and cultured skin fibroblasts was 4-26 times higher than that in
mitochondria and 43-130 times than that in the endoplasmic reticulum,
suggesting that, in human tissues, phytanic acid is oxidized to prist
anic acid in peroxisomes. On the other hand, the oxidation of phytanic
acid in rat liver paralleled the distribution of the mitochondrial ma
rker cytochrome-c oxidase. The 18-fold higher rate of oxidation in dia
lyzed mitochondria (198.6 +/- 4.20 pmol/h/mg of protein) than in perox
isomes (11.0 +/- 0.5 pmol/h/mg of protein) demonstrates that, in roden
ts, phytanic acid is oxidized in mitochondria. 2-[5-(4-Chlorophenyl)pe
ntyl]oxiran-2-carboxylic acid, an inhibitor of carnitine palmitoyltran
sferase I and mitochondrial fatty acid oxidation, inhibits the oxidati
on of phytanic acid in rat tissues (liver and cultured skin fibroblast
s), whereas it has no effect on the oxidation of phytanic acid in huma
n tissues (liver and cultured skin fibroblasts). The higher specific a
ctivity of phytanic acid oxidation in peroxisomes compared with that i
n mitochondria and the endoplasmic reticulum from human tissues and th
e inhibition of phytanic acid oxidation by 2-[5-(4-chlorophenyl)pentyl
]oxiran-2-carboxylic acid in rat tissues (but not human tissues) demon
strate clearly that, in human tissues, phytanic acid is predominantly
oxidized in peroxisomes.