Ia. Alexandrov et al., DEFINITION OF A NEW ALPHA-SATELLITE SUPRACHROMOSOMAL FAMILY CHARACTERIZED BY MONOMERIC ORGANIZATION, Nucleic acids research, 21(9), 1993, pp. 2209-2215
We have analyzed more than 500 alphoid monomers either sequenced in ou
r laboratory or available in the literature. Most of them belonged to
the well studied suprachromosomal families 1, 2 and 3 characterized by
dimeric (1 and 2) and pentameric (3) ancestral periodicities. The seq
uences that did not belong to the previously known families were subje
cted to further analysis. About a half of them formed a relatively hom
ogenous family. Its members were on average 80.5% identical and 89.5%
homologous to the Ml consensus sequence derived from this group (39 mo
nomers). In the genome they do not form any ancestral periodicities ot
her than a monomeric one, and are found at least in chromosomes 13, 14
, 15, 21, 22 and Y. The newly defined family was termed suprachromosom
al family 4. Comparison of all 10 alphoid monomeric groups identified
so far showed that the Ml sequence is closely related to the J1-D2-W4-
W5 homology grouping. Notably the African Green Monkey alpha satellite
, also characterized by monomeric construction, appears to be a member
of the same group.