The large aggregating chondroitin sulfate proteoglycan of cartilage, a
ggrecan, has served as a prototype of proteoglycan structure. Molecula
r cloning has elucidated its primary structure and revealed both known
and unknown domains. To date the complete structures of chicken, rat
and human aggrecans have been deduced, while partial sequences have be
en reported for bovine aggrecan. A related proteoglycan, human versica
n, has also been cloned and sequenced. Both aggrecan and versican have
two lectin domains, one at the amino-terminus which binds hyaluronic
acid and one at the carboxyl-terminus whose physiological ligand is un
known. Both lectins have homologous counterparts in other types of pro
teins. Within the aggrecans the keratan sulfate domain may be variably
present and also has a prominent repeat in some species. The chondroi
tin sulfate domain has three distinct regions which vary in their prom
inence in different species. The complex molecular structure of aggrec
ans is consistent with the concept of exon shuffling and aggrecans ser
ve as suitable prototypes for comprehending the evolution of multi-dom
ain proteins.