SECONDARY AND TERTIARY STRUCTURAL EFFECTS ON PROTEIN NMR CHEMICAL-SHIFTS - AN ABINITIO APPROACH

Citation
Ac. Dedios et al., SECONDARY AND TERTIARY STRUCTURAL EFFECTS ON PROTEIN NMR CHEMICAL-SHIFTS - AN ABINITIO APPROACH, Science, 260(5113), 1993, pp. 1491-1496
Citations number
45
Categorie Soggetti
Multidisciplinary Sciences
Journal title
ISSN journal
00368075
Volume
260
Issue
5113
Year of publication
1993
Pages
1491 - 1496
Database
ISI
SICI code
0036-8075(1993)260:5113<1491:SATSEO>2.0.ZU;2-I
Abstract
Recent theoretical developments permit the prediction of H-1, C-13, N- 15, and F-19 nuclear magnetic resonance chemical shifts in proteins an d offer new ways of analyzing secondary and tertiary structure as well as for probing protein electrostatics. For C-13, phi,psi torsion angl es dominate shielding for Calpha and Cbeta, but the addition of hydrog en bonding and electrostatics gives even better accord with experiment . For N-15H, side chain (chi1) torsion angles are also important, as a re nearest neighbor sequence effects, whereas for H-1N, hydrogen bondi ng is particularly significant. For F-19, weak or long-range electrost atic fields dominate F-19 shielding nonequivalencies. The ability to p redict chemical shifts in proteins from known or test structures opens new avenues to structure refinement or determination, especially for condensed systems.