L. Wu et al., COMPARATIVE KINETIC-ANALYSIS AND SUBSTRATE-SPECIFICITY OF THE TANDEM CATALYTIC DOMAINS OF THE RECEPTOR-LIKE PROTEIN-TYROSINE-PHOSPHATASE-ALPHA, The Journal of biological chemistry, 272(11), 1997, pp. 6994-7002
The catalytic activity and substrate specificity of protein-tyrosine p
hosphatase alpha (PTP alpha) is primarily controlled by the membrane p
roximal catalytic domain (D1). The membrane distal (D2) domain of PTP
alpha by itself is a genuine PTPase, possessing catalytic activity com
parable to that of D1 using aryl phosphates as substrates. Surprisingl
y, k(cat) and k(cat)/K-m for the D2-catalyzed hydrolysis of phosphotyr
osine-containing peptides are several orders of magnitude reduced in c
omparison with those of D1. Substitution of the putative general acid/
base Glu-690 in D2 by an Asp, which is invariably found in the WPD mot
hs in all cytoplasmic PTPases and all the D1 domains of receptor-like
PTPases, only increases the k(cat) for D2 by 4-fold. Thus the much red
uced D2 activity toward peptide substrates may be due to structural di
fferences in the active sites other than the general acid/base. Altern
atively, the D2 domain may have a functional active site with a highly
stringent substrate specificity. PTP alpha display modest peptide sub
strate selectivity and are sensitive to charges adjacent to phosphotyr
osine. In the sequence context of DADEpYLIPQQG (where pY stands for ph
osphotyrosine), the minimal sizes recognized by PTP alpha are either A
DEpYLI or DADEpY-NH2.