APPLICATION OF PCR TO THE DETECTION OF ADENOVIRUSES IN POLLUTED WATERS

Citation
R. Girones et al., APPLICATION OF PCR TO THE DETECTION OF ADENOVIRUSES IN POLLUTED WATERS, Water science and technology, 27(3-4), 1993, pp. 235-241
Citations number
10
Categorie Soggetti
Water Resources","Environmental Sciences","Engineering, Civil
ISSN journal
02731223
Volume
27
Issue
3-4
Year of publication
1993
Pages
235 - 241
Database
ISI
SICI code
0273-1223(1993)27:3-4<235:AOPTTD>2.0.ZU;2-L
Abstract
A method for the detection of adenovirus in environmental samples has been developed. We tested several systems for concentrating viral part icles by adding adenoviruses 2 and 12 to different sewage samples. The method selected was as follows: centrifugation of the sample in order to pellet adenovirus viral particles and all suspended solids, elutio n of the pelleted viruses by treatment with 0.25N glycine buffer pH 9. 5, removal of solids from the sample by a short centrifugation and ult racentrifugation of the resulting supernatant. Elution with glycine bu ffer avoided inhibitors and showed more sensitivity than ultrasonicati on or filtration through a low binding protein filter to retain bacter ia and suspended solids. Sewage samples were treated by this selected method and recovered viral particles were analyzed both by a two-step DNA amplification reaction and by infecting Hep-2 cells. About 50% of the samples were positive in a two-step PCR and these data were confir med by tissue culture amplification and one step PCR. Two pairs of pri mers (external and nested) from the hexon region were used, which are able to detect human adenovirus from all subgenera. Although more stud ies are needed, the two-step PCR developed appears to be a quick and r eliable method for adenovirus detection in environmental samples.