M. Garciadiaz et al., ALCOHOL ESTERIFICATION REACTIONS AND MECHANISMS OF SNAKE-VENOM 5'-NUCLEOTIDE PHOSPHODIESTERASE, European journal of biochemistry, 213(3), 1993, pp. 1139-1148
In a previous study we have shown that snake venom 5'-nucleotide phosp
hodiesterase (SVP) catalyzes methanol-esterification reactions [Garcia
-Diaz, M., Avalos, M. & Cameselle, J. C. (1991) Eur J. Biochem. 196, 4
51-457]. Now we have demonstrated that SVP catalyzes AMP transfer from
ATP to propanol, ethanol, methanol, ethylene glycol, glycerol, 2-chlo
roethanol or 2,2-dichloroethanol. The AMP-O-alkyl ester products were
identified by HPLC, enzyme analysis, ultraviolet and NMR spectroscopy.
Those results show the potential of SVP as a tool to prepare 5'-nucle
otide esters and agree with the formation of a covalent 5'-nucleotidyl
-SVP intermediate susceptible to nucleophilic attack by short-chain (p
oly)alcohols as acceptors alternative to water. To test the kinetic in
fluence of the solvent nucleophile in SVP mechanisms. initial rates of
ATP solvolysis were assayed in different water/alcohol mixtures. Rela
tively high alcohol concentrations inactivated SVP but lower concentra
tions gave proportional rates of alcoholysis. An efficiency parameter
(E(A)), defined as the ratio of the mole fraction of AMP-O-alkyl ester
as a product to that of alcohol as an acceptor in water/alcohol mixtu
res, made possible the comparison of alcohols and water as AMP accepto
rs at low concentrations, as it could be reasoned that E(A) = 1 for wa
ter. Rates of hydrolysis (V(H)) of substrates yielding AMP and differe
nt leaving groups were also assayed. The higher E(A) and V(H) values c
orresponded, respectively, to those acceptors and leaving-group conjug
ate acids with lower pK(a) and higher polar-substituent constants (sig
ma). The results support the occurrence of general acid-base catalysi
s in the active center of SVP and the identification of rate-limiting
steps. A model is proposed for the mechanisms of SVP-catalyzed hydroly
sis and alcoholysis which accounts for the influence of the acid-base
properties of alcohols on the kinetic profile of SVP reaction sequence
s.