R. Bogumil et al., X-BAND AND Q-BAND EPR STUDIES ON THE 2 MN-2-SUBSTITUTED METAL-BINDINGSITES OF D-XYLOSE ISOMERASE(), European journal of biochemistry, 213(3), 1993, pp. 1185-1192
The two metal-binding sites (A and B)/subunit of the homotetrameric D-
xylose isomerase (Xyl isomerase) from Streptomyces rubiginosus have be
en studied with Mn2+-EPR spectroscopy at X-band and Q-band frequencies
and with electronic spectroscopy. Displacement studies in the visible
absorbance range showed that Mn2+ have a higher affinity for the B si
te. With the low-affinity A site unoccupied, the coordination sphere o
f Mn2+ in the B site is quite distorted giving rise to a highly anisot
ropic X-band EPR spectrum. Simulation of the Q-band spectrum reveals a
zero field splitting (zfs) D of about 45-48 mT and a rhombicity param
eter E/D between 0.2 and 0.3. Occupation of both binding sites with Mn
2+ induces a significant shift towards a higher symmetry in the coordi
nation sphere of the B site resulting in similar zfs parameters for bo
th binding sites. The change in A-site environment caused by B-site oc
cupation was analysed in mixed Xyl isomerase derivatives, in which the
B site is loaded with Co2+, Cd2+ or Pb2+ and the A site with Mn2+. In
the Co2+/Mn2+ Xyl isomerase the Mn2+ has a relatively symmetric ligan
d environment with small zfs parameters (D = 12 mT, E/D < 0.15). Subst
ituting Co2+ with Cd2+ or Pb2+ in the B site leads to a drastic increa
se in the zfs parameters of Mn2+ in the A site. The distortions are di
rectly linked to the ionic radii of the ions bound to the B site and m
ay be mediated by the carboxylate group of Glu216 that bridges the met
al-binding sites. The EPR spectra also reflect the catalytic activity
of the mixed metal samples. With the larger Cd2+ or Pb2+ in the B site
, which are strongly influencing the stereochemistry of the A site, th
e catalytic activity is lost, whereas Co2+ and Mn2+ render the enzyme
in an active state, so that the mutual influence on catalysis depends
on the complex geometry of both metal-binding sites.