Ab. Ivlev et al., TRITIUM PLANIGRAPHY OF BIOLOGICAL-SYSTEMS - PRINCIPLES OF THE METHOD AND A MATHEMATICAL-MODEL, Molecular biology, 26(5), 1992, pp. 695-699
In studying the surface of biological macromolecules by tritium planig
raphy, the data obtained usuallY are correlated with the results of ca
lculating the accessible surface by the Lee-Richards algorithm (for ob
jects of known spatial structure). Therewith the fundamental differenc
es between the model taken as the basis for calculations and the mecha
nism of tritium label incorporation are completely ignored. In the pre
sent work a new algorithm is proposed for calculating the accessible s
urface area that more adequately reflects the specific conditions of t
he chemical reactions taking place on the surface of a biological obje
ct bombarded with atomic tritium. The best agreement between the calcu
lations and the experimental data was achieved for an effective radius
of the testing probe of 1.1 angstrom. Estimates were obtained for the
probabilities of interaction between atomic tritium and amino acid re
sidues, normalized over the accessible surface area. The accessible su
rface area of the first 20 N-terminal residues of sperm whale myoglobi
n is calculated according to the proposed model and to the Lee-Richard
s algorithm for water molecules. The results of these calculations are
shown to be appreciably different.