Linkage relationships among 29 polymorphic loci were investigated in J
apanese red pine, Pinus densiflora Sieb. et Zucc. Haploid megagametoph
ytes from 12 highly heterozygous plus-tree clones were used. A total o
f 217 pairs of two-locus combinations were available for the linkage s
tudy. Chi-square and Akaike Information Criterion analyses identified
19 pairs of linkages. Close linkages (r = 0-0. 10) were seen for Est-2
,3 - Aap-2,3, Dia-1 - Acp, and Shd-1 - Got-1. Strong linkages (r = 0.
10-0.20) were seen for Est-2,3 - Dia-1, Est-2,3 - Acp, Aap-2,3 - Dia-1
, Got-2 - Lap-1, and Pgm - Aap-1. Moderate linkages (r = 0.20-0.30) we
re seen for Adh - Sod, Adh - Pgi-1, 2, Adh - Lap-1, G2d - G6p, and Dia
-2 - Amy pair of linkages. The remaining six pair combinations, namely
6Pg- 1 - Est-2,3, 6Pg-1 - Acp, Est-1 - Acp, Est-2,3 - Shd-1, Sod - Pg
i-1, 2, and Adh - Got-2 were weakly linked (r = 0.30-0.40). In all, 22
loci were classified into five linkage groups by means of three-point
mapping methods.