J. Bristow et al., ABUNDANT ADRENAL-SPECIFIC TRANSCRIPTION OF THE HUMAN P450C21A PSEUDOGENE, The Journal of biological chemistry, 268(17), 1993, pp. 2919-2924
Human adrenal steroid 21-hydroxylase (P450c21) is encoded by the CYP21
A1 (21B) gene located in the class III region of the HLA locus. A tand
emly duplicated gene designated CYP21A1P (21A), which lies 30 kilobase
s upstream, contains several point mutations and an 8-base pair deleti
on so that it cannot encode P450c21 protein; as a result, it is genera
lly considered to be a pseudogene. We previously showed that two addit
ional genes, XA and XB, lie on the opposite strand of DNA overlapping
the 3'-ends of the 21A and 21B genes. We have now identified a third p
air of duplicated overlapping genes in this locus, termed YA and YB, w
hose transcriptional orientation is the same as 21A and 21B and opposi
te to XA and XB. YA transcripts use the 21A promoter, have 5'-ends tha
t are similar to 21B mRNA, and have approximately 10-20% of the abunda
nce of 21B transcripts, but have unique 3'-ends. The YA gene encodes a
7.5-kilobase RNA that overlaps XA completely and a 3.0-kilobase RNA t
hat excludes most of XA. The YB gene appears to be similar in size and
organization to YA. The YA and YB genes extend beyond the limit of th
e duplication in this locus; hence, their cDNAs are distinguishable by
differences in their 3'-sequences. YA and YB transcripts are expresse
d only in the fetal and adult adrenal glands, but their cDNAs do not c
ontain a long open reading frame. Although the function of these genes
is not yet clear, the complex genetic organization of three overlappi
ng genes (21/X/Y) appears to be unique among higher eukaryotes. As YA
transcription is initiated by the 21A 5'-flanking DNA and includes 21A
sequences, the designation of 21A as a ''pseudogene'' merits reconsid
eration.