Eight Drosophila species of the obscura subgroup were screened for seq
uences homologous to the gypsy retrotransposon of D. melanogaster. Mol
ecular characterization of gypsy sequences was first approached throug
h digesting genomic DNAs from these obscura species with appropriate r
estriction enzymes and subjecting them to Southern blot analysis. The
results of this analysis indicate that gypsy-homologous sequences are
well conserved among species of the obscura subgroup. With the excepti
on of D. guanche, all other species bear a 7 kb XhoI fragment that rep
resents the complete element in D. melanogaster. Lower molecular weigh
t fragments that could be deleted elements. are shared by different sp
ecies. Both types of element probably existed before the divergence of
this subgroup. Two different species clusters could be established on
the basis of hybridization patterns, one represented by D. subobscura
and its relative species D. guanche and D. madeirensis, and the other
, in which D. obscura, D. tristis and D. subsilvestris are included: