Directed mutagenesis has been applied to the cloned genes of barnase a
nd barstar, the extracellular ribonuclease of Bacillus amyloliquefacie
ns and its intracellular inhibitor, to locate residues involved in the
mutual recognition of these two proteins. Arg59 and His102 of barnase
and Asp35 and Asp39 of barstar have been so identified. With both Cys
40 and Cys82 mutated to alanines, barstar is still produced in high yi
eld and is functional both in vitro and in vivo. Methods devised for d
etermining relative and absolute dissociation coefficients for various
combinations of mutant and wild-type proteins have allowed us to dete
rmine a dissociation coefficient for the complex of wild-type barnase
and barstar of about 10(-13) M, with off and on rate constants of 10(-
5) s-1 and 10(8) M-1 s-1, respectively.