The association between multiple sclerosis (MS) and alleles of the HLA
class II genes indicates that at least one MS susceptibility gene is
linked to the HLA class II region. However, the actual locus responsib
le has not been precisely identified. The recent cloning of new genes
involved in antigen processing that map within the HLA class II region
led us to investigate-using the restriction fragment length polymorph
ism (RFLP) technique and sequence-specific oligonucleotide analysis-wh
ether these genes might play a role in conferring susceptibility to MS
. We studied large multifunctional protease (LMP) 2 and 7 and transpor
ter associated with antigen processing (TAP) 1 and 2 gene polymorphism
s in 60 HLA-DR2 MS patients and 60 HLA-DR2 healthy subjects and found
no specific or preferential RFLP patterns or coding sequence variants
in the patient group. Our data do not support a role for these genes i
n MS susceptibility.