Adenovirus EIA encodes two major proteins of 289 and 243 amino acids (
289R and 243R), which both have transcription regulatory properties. E
1A-289R is a transactivator whereas EIA-243R primarily functions as a
repressor of transcription. Here we show that EIA repression is not re
stricted to RNA polymerase II genes but also includes the adenovirus v
irus-associated (VA) RNA genes. These genes are transcribed by RNA pol
ymerase III and have previously been suggested to be the target of an
EIA-289R-mediated transactivation. Surprisingly, we found that during
transient transfection both EIA proteins repressed VA RNA transcriptio
n. E1A repression of VA RNA transcription required both conserved regi
ons 1 and 2 and therefore differed from the EIA-mediated inhibition of
simian virus 40 enhancer activity which primarily required conserved
region 1. The repression was counteracted by the E1B-19K protein, whic
h also, in the absence of E1A, enhanced the accumulation of VA RNA. Im
portantly, we show that efficient VA RNA transcription requires expres
sion of both E1A and the E1B-19K protein during virus infection.