Crystal structures of haloalkane dehalogenase were determined in the p
resence of the substrate 1,2-dichloroethane. At pH 5 and 4-degrees-C,
substrate is bound in the active site without being converted; warming
to room temperature causes the substrate's carbon-chlorine bond to be
broken, producing a chloride ion with concomitant alkylation of the a
ctive-site residue Asp124. At pH 6 and room temperature the alkylated
enzyme is hydrolysed by a water molecule activated by the His289-Asp26
0 pair in the active site. These results show that catalysis by the de
halogenase proceeds by a two-step mechanism involving an ester interme
diate covalently bound at Asp124.