A flow cytometric method for the routine analysis of environmental wat
er samples for the presence of Cryptosporidium oocysts has been develo
ped. It uses a Coulter Epics Elite flow cytometer to examine water sam
ples and to separate oocysts from contaminating debris by cell sorting
. The sorted particles are then rapidly screened by microscopy. The me
thod has been evaluated and compared with direct epifluorescence micro
scopy on 325 river, reservoir and drinking water samples. The techniqu
e was found to be more sensitive, faster and easier to perform than co
nventional epifluorescent microscopy for the routine examination of wa
ter samples for Cryptosporidium.