Mem. Noble et al., STRUCTURE OF TRIOSEPHOSPHATE ISOMERASE FROM ESCHERICHIA-COLI DETERMINED AT 2.6-ANGSTROM RESOLUTION, Acta crystallographica. Section D, Biological crystallography, 49, 1993, pp. 403-417
The structure of triosephosphate isomerase (TIM) from the organism Esc
herichia coli has been determined at a resolution of 2.6 angstrom. The
structure was solved by the molecular replacement method, first at 2.
8 angstrom resolution with a crystal grown by the technique of hanging
-drop crystallization from a mother liquor containing the transition-s
tate analogue 2-phosphoglycolate (2PG). As a search model in the molec
ular replacement calculations, the refined structure of TIM from Trypa
nosoma brucei, which has a sequence identity of 46% compared to the en
zyme from E. coli, was used. An E. coli TIM crystal grown in the absen
ce of 2PG, diffracting to 2.6 angstrom resolution, was later obtained
by application of the technique of macro-seeding using a seed crystal
grown from a mother liquor without 2PG. The final 2.6 angstrom model h
as a crystallographic R factor of 11.9%, and agrees well with standard
stereochemical parameters. The structure of E. coli TIM suggests the
importance of residues which favour helix initiation for the formation
of the TIM fold. In addition, TIM from E. coli shows peculiarities in
its dimer interface, and in the packing of core residues within the b
eta-barrel.