Zt. Shi et al., MECHANISM OF ADENYLATE KINASE - WHAT CAN BE LEARNED FROM A MUTANT ENZYME WITH MINOR PERTURBATION IN KINETIC-PARAMETERS, Biochemistry, 32(25), 1993, pp. 6450-6458
The structural and functional roles of threonine-23 in the chicken mus
cle adenylate kinase (AK) were investigated by site-directed mutagenes
is coupled with proton nuclear magnetic resonance (NMR) and phosphorus
stereochemistry. The residue is potentially important because it is c
onserved among all types of AK and is part of the consensus P-loop seq
uence, 15GXPGXGKGT23. A mutant enzyme T23A (replacing threonine-23 wit
h alanine) was constructed. Analyses of conformational stability and p
roton NMR indicate that the side chain of this residue contributes lit
tle to the structure of AK, which suggests that the side chain of Thr-
23 does not play a structural role. The steady-state kinetic data of t
he mutant enzyme T23A showed no change in k(cat) and only 5-7-fold inc
reases in K(m) and dissociation constants. Such minor changes in kinet
ic data are insufficient to suggest a functional role of Thr-23. Howev
er, two-dimensional NMR analyses of WT.MgAP5A and T23A.MgAP5A complexe
s indicated that the side chain of Thr-23 is in proximity to the adeni
ne ring of the ATP moiety in the WT-MgAP5A complex in solution. In add
ition, T23A showed a significant perturbation in the stereospecificty
toward the diastereomers of (R(p))- and (S(p))-adenosine 5'-(1-thiotri
phosphate) (ATPalphaS), with the R(p)/S(p) ratio increased from <0.02
in wild-type to 0.37 in T23A. Detailed P-31 NMR analysis indicated tha
t the stereospecificity at the AMP site was not perturbed. These resul
ts suggest that the side chain of Thr-23 is involved in catalysis, mos
t likely via a hydrogen bonding interaction Thr-OH...O-P(alpha)(ATP).
Thus, even though it is not obvious from the kinetic data of the mutan
t T23A, the side chain of Thr-23 does interact directly with ATP durin
g catalysis. The significance of these results is discussed in relatio
n to the structure-function relationship of adenylate kinase in partic
ular and the use of site-directed mutagenesis in the study of enzyme m
echanism in general.