E. Verdin et al., CHROMATIN DISRUPTION IN THE PROMOTER OF HUMAN-IMMUNODEFICIENCY-VIRUS TYPE-1 DURING TRANSCRIPTIONAL ACTIVATION, EMBO journal, 12(8), 1993, pp. 3249-3259
Chromatin organization of eukaryotic promoters is increasingly recogni
zed as an important factor in the regulation of transcription in vivo.
To determine the role of chromatin in HIV-1 expression, we have exami
ned the nucleosome organization of the promoter of HIV-1 under low and
high transcription rates. Independently of the cell line examined, nu
cleosomes are precisely positioned in the viral 5' long terminal repea
t (5' LTR) and define two large nucleosome-free regions encompassing n
t 200-450 and 610-720. A nucleosome positioned between these two regio
ns, immediately after the transcription initiation site (nuc-1), is di
srupted following TPA or TNF-alpha treatment. The disruption of nuc-1
from DNA is independent of DNA replication since it is completed in 20
min and independent of transcription as it is alpha-amanitin insensit
ive. A model is proposed in which nuc-1 plays an organizing role in th
e HIV-1 promoter to bring in close proximity factors bound to DNA in t
he two nucleosome-free regions, upstream and downstream of the site of
transcription initiation. These results define chromatin as an integr
al component of the HIV-1 transcriptional regulatory machinery and ide
ntify a chromatin transition associated with activation of viral gene
expression.