A stretch of six histidine residues (His6) has been genetically fused
to the C terminus of the beta' polypeptide of Escherichia coli RNA pol
ymerase. The His6-tagged beta' subunit assembles into RNA polymerase m
olecules which perform all vital in vivo functions and behave qualitat
ively normally in vitro. The HiS6 tag permits rapid purification of th
e enzyme directly from crude cell extracts or from an in vitro reconst
itution reaction by adsorption to Ni2+-chelating agarose resin, follow
ed by elution with imidazole. The enzyme bound to the matrix remains t
ranscriptionally active. The immobilized enzyme can withstand repeated
buffer changes without substantial activity loss and permits controll
ed stepwise 'walking' of the transcriptional complex along the DNA tem
plate, and isolation of defined intermediates in the transcription cyc
le. The immobilized RNA polymerase provides a powerful experimental sy
stem for structural and functional analysis of RNA polymerase and its
interaction with regulatory factors.