We have analyzed the M-bcr breakpoint position in 133 Philadelphia-pos
itive chronic myeloid leukemia patients and correlated the findings wi
th clinical, hematologic, and cytogenetic data. We also investigated t
he splicing pattern of the BCR-ABL mRNA in 30 patients, using reverse
transcriptase PCR. No statistically significant differences were found
between breakpoint position within M-bcr and clinical parameters at d
iagnosis, the karyotypic evolution pattern, or the leukemic phenotype
during blast crisis. Furthermore, the breakpoint position within M-bcr
did not correlate with the duration of chronic phase or survival time
. When the splicing pattern of the BCR-ABL mRNA was compared with the
results of the genomic breakpoint mapping, it was found that approxima
tely 60% (8/14) of the patients with a 5' break expressed b2a2 fusion
mRNA, whereas all patients (10/10) with a 3' break expressed b3a2 BCR-
ABL mRNA.