G. Ziegelin et al., PHAGE-P4 ALPHA-PROTEIN IS MULTIFUNCTIONAL WITH ORIGIN RECOGNITION, HELICASE AND PRIMASE ACTIVITIES, EMBO journal, 12(9), 1993, pp. 3703-3708
Alpha protein of satellite phage P4 of Escherichia coli is multifuncti
onal in P4 replication with three activities. First, the protein (subu
nit M(r) = 84 900) complexes specifically the P4 origin and the cis re
plication region required for replication. Alpha protein interacts wit
h all six type I repeats (TGTTCACC) present in the origin. Second, ass
ociated with the alpha protein is a DNA helicase activity that is fuel
ed by hydrolysis of a nucleoside 5' triphosphate. All common NTPs exce
pt UTP and dTTP can serve as cofactors. Strand separation of partial d
uplexes containing tailed ends that resemble a replication fork is pre
ferred, although a preformed fork is not absolutely required for the e
nzyme to invade and unwind duplex DNA. Alpha protein catalyzes unwindi
ng in the 3'-->5' direction with respect to the strand it has bound. F
inally, the primase activity already demonstrated for alpha protein is
due to synthesis of RNA primers. In vitro, alpha protein generates di
- to pentaribonucleotides on single-stranded phage fd DNA. The predomi
nant product is the dimer pppApG, on which most of the longer oligorib
o-nucleotides are based. Using DNA oligonucleotides of defined sequenc
e as templates, synthesis of pppApG was also detectable. To date, amon
g prokaryotic and eukaryotic replication systems, gpalpha is the only
protein known that combines three activities on one single polypeptide
chain.