7-DEAZAADENOSINE - OLIGORIBONUCLEOTIDE BUILDING-BLOCK SYNTHESIS AND AUTOCATALYTIC HYDROLYSIS OF BASE-MODIFIED HAMMERHEAD RIBOZYMES

Citation
F. Seela et al., 7-DEAZAADENOSINE - OLIGORIBONUCLEOTIDE BUILDING-BLOCK SYNTHESIS AND AUTOCATALYTIC HYDROLYSIS OF BASE-MODIFIED HAMMERHEAD RIBOZYMES, Helvetica Chimica Acta, 76(5), 1993, pp. 1809-1820
Citations number
48
Categorie Soggetti
Chemistry
Journal title
ISSN journal
0018019X
Volume
76
Issue
5
Year of publication
1993
Pages
1809 - 1820
Database
ISI
SICI code
0018-019X(1993)76:5<1809:7-OBSA>2.0.ZU;2-G
Abstract
A 7-deazaadenosine (= tubercidin; c7A; 1) building block for solid-pha se oligoribonucleotide synthesis was prepared. The amino group of 1 wa s protected with the (dimethylamino)methylidene residue (-->3), and th e monomethoxytrityl group was introduced at OH-C(5') (-->4). Protectio n of OH-C(2') was carried out by silylation, showing that use of the ( i-Pr)3Si group resulted in high 2'-O-selectivity (-->5b, 80%). Reactio n of 5b with PCl3 afforded the phosphonate 7 which was used in solid-p hase oligoribonucleotide synthesis. The autocatalytic hydrolysis of ha mmerhead ribozymes using -C-C-C-U-U-C-G-G-G-G-A-C-U-C-U-G-A-A-G-A-G-G- C-G-C as substrate strand (S) and modified G-C-G-C-C-G-A-A-A-C-U-C-C-C as enzyme strand (E) was studied. When c7A replaced A13 or A14, a sma ll decrease of catalytic activity was observed, while modification in position A15 enhanced the autocatalytic hydrolysis. The results demons trate, that the atom N(7) of adenosine in any of these positions is no t crucial for ribozyme action.