Bw. Kennedy et D. Trus, CONSIDERATIONS ON GENETIC CONNECTEDNESS BETWEEN MANAGEMENT UNITS UNDER AN ANIMAL-MODEL, Journal of animal science, 71(9), 1993, pp. 2341-2352
Connectedness among management units (e.g., herds or regions) is of co
ncern in genetic evaluation. When genetic evaluation is under an anima
l model, connections occur through A, the numerator relationship matri
x. It is argued that the most appropriate measure of connectedness is
the average prediction error variance (PEV) of differences in EBV betw
een animals in different management units. It is shown that PEV of dif
ferences is influenced by average genetic relationship between and wit
hin management units, which in turn affects the variances of estimates
of differences between management unit effects. When PEV of differenc
es cannot be computed, use of one of three alternative measures is pro
posed; the gene-flow method that measures the exchange of genes betwee
n management units, measurement of genetic drift variance based on ave
rage relationships between and within management units, and measuremen
t of the variance of estimated differences between management units ef
fects. These were correlated with PEV of differences in a test simulat
ion. The gene-flow method, which is simplest to compute, had the lowes
t correlation (.671). The drift variance and variance of management un
it effects methods were highly correlated with PEV of differences (.92
4 and .995, respectively).