AN ANALYSIS OF THE FRACTAL PROPERTIES OF THE SURFACES OF GLOBULAR-PROTEINS

Citation
Ba. Fedorov et al., AN ANALYSIS OF THE FRACTAL PROPERTIES OF THE SURFACES OF GLOBULAR-PROTEINS, The Journal of chemical physics, 99(5), 1993, pp. 4076-4083
Citations number
25
Categorie Soggetti
Physics, Atomic, Molecular & Chemical
ISSN journal
00219606
Volume
99
Issue
5
Year of publication
1993
Pages
4076 - 4083
Database
ISI
SICI code
0021-9606(1993)99:5<4076:AAOTFP>2.0.ZU;2-8
Abstract
The fractal properties of the surfaces of ten globular protein molecul es have been investigated by calculations that made use of crystallogr aphic data on the atomic coordinates of these proteins. On length scal es from about 1.5 to at least 7.5 angstrom, the fractal dimensions D(s ) of the protein surfaces were found to lie between 2.10 and 2.17 and thus were not much greater than the value D(s) = 2 characteristic of a smooth surface. The calculated fractal dimensions D(s) did not depend on the molecular mass, molecular diameter, biological function, or or igin of the proteins.