Zfy1 and Zfy2 are homologous zinc finger genes on the mouse Y Chromoso
me. To ask whether these genes are properly classified as members of t
he ZFY family, we have characterized and compared their genomic organi
zation to that of mouse Zfx, human ZFX; and human ZFY. We show that Zf
y1 has 11 exons distributed across at least 56 kb, and Zfy2 has a mini
mum of 9 exons distributed across at least 52 kb. The Zfy2 locus conta
ins regions similar in size and sequence to all 11 exons of Zfy1, plus
an additional 5' UTR exon. All splice sites conform to the GT-AG rule
. There are two instances of additional AG dinucleotides immediately 5
' of 3' splice sites. Zfy1 and Zfy2 are homologous to other ZFY family
members within the coding region, but the untranslated regions show n
o sequence similarity. Within the coding region, there is conservation
of exon length and splice sites, with each splice preceding the secon
d nucleotide of a codon. We conclude that Zfy1 and Zfy2 are indeed mem
bers of the ZFY family, which has evolved from a single common ancestr
al gene. (C) 1997 Academic Press.