Adenovirus vectors are extensively used for high-level expression of p
roteins in mammalian cells and are receiving increasing attention for
their potential use as live recombinant vaccines and as transducing vi
ruses for use in gene therapy. Although it is commonly argued that one
of the chief advantages of adenovirus vectors is their relative stabi
lity, this has not been thoroughly investigated. To examine the geneti
c stability of adenovirus type 5 vectors and in particular to examine
the relationship between genetic stability and genome size, adenovirus
vectors were constructed with inserts of 4.88 (herpes simplex virus t
ype 1 gB), 4.10 (herpes simplex virus type 1 gB), or 3.82 (LacZ) kb co
mbined with a 1.88-kb E3 deletion or with a newly generated 2.69-kb E3
deletion. The net excess of DNA over the wild-type (wt) genome size r
anged from 1.13 to 3.00 kb or 3.1 to 8.3%. Analysis of these vectors d
uring serial passage in tissue culture revealed that when the size exc
eeded 105% of the wt genome length by approximately 1.2 kb (4.88-kb in
sert combined with a 1.88-kb deletion), the resulting vector grew very
poorly and underwent rapid rearrangement, resulting in loss of the in
sert after only a few passages. In contrast, vectors with inserts resu
lting in viral DNA close to or less than a net genome size of 105% of
that of the wt grew well and were relatively stable. In general, virus
es with genomes only slightly above 105% of that of the wt were unstab
le and the rapidity with which rearrangement occurred correlated with
the size of the insert. These findings suggest that there is a relativ
ely tight constraint on the amount of DNA which can be packaged into v
irions and that exceeding the limit results in a sharply decreased rat
e of virus growth. The resultant strong selection for variants which h
ave undergone rearrangement, generating smaller genomes, is manifested
as genetic instability of the virus population.