SOFTWARE FOR COUNTING CELLS AND ESTIMATING STRUCTURAL VOLUMES WITH THE OPTICAL DISSECTOR AND FRACTIONATOR

Citation
Rp. Bolender et Js. Charleston, SOFTWARE FOR COUNTING CELLS AND ESTIMATING STRUCTURAL VOLUMES WITH THE OPTICAL DISSECTOR AND FRACTIONATOR, Microscopy research and technique, 25(4), 1993, pp. 314-324
Citations number
20
Categorie Soggetti
Microscopy,Biology
ISSN journal
1059910X
Volume
25
Issue
4
Year of publication
1993
Pages
314 - 324
Database
ISI
SICI code
1059-910X(1993)25:4<314:SFCCAE>2.0.ZU;2-N
Abstract
We describe MS-DOS software for the optical volume fractionator (OV , a stereological method combining the principles of the optical disecto r (Gundersen et al.: Acta Pathol. Microbiol. Immunol. Scand., 96:857-8 81, 1988) and fractionator (Gundersen: J. Microsc., 143:3-45, 1986). T he OVF program estimates the volume of a fixed and embedded structure, the numerical density of cells, and the total number of cells in a st ructure. The hardware requirements include a PC computer (386 or 486 w ith VGA graphics) and a conventional light microscope fitted with a ro tating stage, extension tube, and length gauge. The software includes an introduction, tutorial, simulator, laboratory toolkit, and report g enerator. The toolkit improves the efficiency of gathering stereologic al data with light microscopy and offers a convenient link between the data of light and electron microscopy. A novel algorithm, based on fr actionator sampling, gives the volume of a fixed and embedded structur e from the same set of sections used for cell counting. A laboratory e xample illustrates the operation of the software.