Jj. Dooley et al., PHYLOGENETIC GROUPING AND IDENTIFICATION OF RHIZOBIUM ISOLATES ON THEBASIS OF RANDOM AMPLIFIED POLYMORPHIC DNA PROFILES, Canadian journal of microbiology, 39(7), 1993, pp. 665-673
Through the use of a single, random 15mer as a primer, between 1 and 1
2 DNA amplification products were obtained per strain from a selection
of 84 Rhizobium and Bradyrhizobium isolates. A principal-coordinate a
nalysis was used to analyse the resulting amplified DNA profiles and i
t was possible to assign isolates to specific groupings. Within the sp
ecies Rhizobium leguminosarum, the biovar phaseoli formed a distinct g
roup from the other biovars of the species, viciae and trifolii, which
grouped together. Isolates of Rhizobium meliloti and Bradyrhizobium s
pecies formed their own clear, specific groups. Although it was possib
le to identify individual isolates on the basis of differences in thei
r amplified DNA profiles, there was evidence that some amplified segme
nts were conserved among individuals at the biovar and species levels.