NUCLEOTIDE-SEQUENCE COMPARISON OF THE VP8-ASTERISK GENE OF ROTAVIRUSES POSSESSING THE AU-1 GENE 4 ALLELE

Citation
O. Nakagomi et al., NUCLEOTIDE-SEQUENCE COMPARISON OF THE VP8-ASTERISK GENE OF ROTAVIRUSES POSSESSING THE AU-1 GENE 4 ALLELE, Journal of General Virology, 74, 1993, pp. 1709-1713
Citations number
30
Categorie Soggetti
Virology
Journal title
ISSN journal
00221317
Volume
74
Year of publication
1993
Part
8
Pages
1709 - 1713
Database
ISI
SICI code
0022-1317(1993)74:<1709:NCOTVG>2.0.ZU;2-X
Abstract
Of the five currently recognized alleles of the human rotavirus VP4 ge ne, the AU-1 allele has captured attention because of its possible non -human origin. The 5' 750 nucleotide region of the VP4 gene, encoding the VP8 fragment amino acids (aa) 1 to 241! and the connecting pepti de (aa 242 to 247), from 13 human and two feline rotavirus strains pos sessing the AU-1 allele was highly conserved both at the nucleotide se quence (93.8 to 99.7% identity) and amino acid level (95.5 to 100 % id entity) irrespective of the year and the place of isolation or of the host species from which these viruses were isolated. This is consisten t with the hypothesis that the AU-1 allele of the VP4 gene has been ma intained in both human and feline rotavirus gene pools.