Pf. Kemp et al., ESTIMATING THE GROWTH-RATE OF SLOWLY GROWING MARINE-BACTERIA FROM RNA-CONTENT, Applied and environmental microbiology, 59(8), 1993, pp. 2594-2601
In past studies of enteric bacteria such as Escherichia coli, various
measures of cellular RNA content have been shown to be strongly correl
ated with growth rate. We examined this correlation for four marine ba
cterial isolates. Isolates were grown in chemostats at four or five di
lution rates, yielding growth rates that spanned the range typically d
etermined for marine bacterial communities in nature (mu = 0.01 to 0.2
5 h-1). All measures of RNA content (RNA cell-1, RNA:biovolume ratio,
RNA:DNA ratio, RNA:DNA:biovolume ratio) were significantly different a
mong isolates. Normalizing RNA content to cell volume substantially re
duced, but did not eliminate, these differences. On average, the corre
lation between mu and the RNA:DNA ratio accounted for 94% of variance
when isolates were considered individually. For data pooled across iso
lates (analogous to an average measurement for a community), the ratio
of RNA:DNA mum-3 (cell volume) accounted for nearly half of variance
in mu (r2 = 0.47). The maximum RNA:DNA ratio for each isolate was extr
apolated from regressions. The regression of (RNA-DNA)/(RNA:DNA)max on
mu was highly significant (r2 = 0.76 for data pooled across four isol
ates) and virtually identical for three of the four isolates, perhaps
reflecting an underlying common relationship between RNA content and g
rowth rate. The dissimilar isolate was the only one derived from sedim
ent. Cellular RNA content is likely to be a useful predictor of growth
rate for slowly growing marine bacteria but in practice may be most s
uccessful when applied at the level of individual species.