During a 9-month period water samples were collected monthly from 6 dr
inking water production plants located in Flanders. Of 249 presumptive
aeromonads isolated on ampicilline dextrin agar, 228 isolates were cl
assified in the genus Aeromonas by gasliquid chromatography of cellula
r fatty acid methyl esters (FAME) using a commercial database. To iden
tify these isolates at the species level, we created a new and more ex
tended database of FAME profiles using 70 Aeromonas reference and type
strains of known hybridization groups (HGs). Our database allowed ide
ntification of 186 Aeromonas isolates at phenospecies level and 125 is
olates were further allocated to an existing HG. These data showed tha
t A. hydrophila and A. caviae were predominant in the collected water
samples. We also investigated the usefulness of a new genomic fingerpr
inting technique, Amplified Fragment Length Polymorphism (AFLP). Altho
ugh we observed HG-specific AFLP-patterns enabling us to characterize
strains of one particular HG, strains within the same HG could be clea
rly differentiated from each other. In general, identification of isol
ates by the AFLP technique corresponded well with the results obtained
by FAME analysis.