Rw. Williams et al., SCALED QUANTUM-MECHANICAL FORCE-FIELD FOR CIS-GLYCINE AND TRANS-GLYCINE IN ACIDIC SOLUTION, Journal of molecular structure. Theochem, 100(2-3), 1993, pp. 157-171
We obtain one set of ab initio scale factors for two conformational is
omers of glycine in acidic solution. Ab initio calculations are perfor
med using the 4-31G basis set. Force constants from two fully optimize
d glycine-H+.4H2O supermolecules are scaled using vibrational frequenc
ies of glycine in water at pH 0.8. Similar calculations are shown for
methylamine-H+ and acetic acid. Reasonable agreement is obtained betwe
en calculated and experimental frequencies for glycine-H+, acetic acid
, and methylamine-H+. Comparisons between scale factors for these mole
cules show that scale factors for the same symmetry coordinates are si
milar in most cases and indicate the extent to which scale factors can
be transferred between these molecules. These scale factors are being
used to build a scaled quantum mechanical force field for alanine, an
d subsequently for peptides in aqueous solutions.