In the present study, we determined the sequence of group I self-splic
ing introns found in the large ribosomal RNA subunit of Candida albica
ns, Candida stellatoidea and the recently-described species Candida du
bliniensis. It was found that both the intron and ribosomal RNA nucleo
tide sequences are almost perfectly identical between different C. alb
icans strains as well as between C. albicans and C. stellatoidea strai
ns. Comparisons of ribosomal RNA sequences suggest that local isolates
of atypical C. albicans from individuals infected with human immunode
ficiency virus can be assigned to the C. dubliniensis species. C. dubl
iniensis strains also harbor a group I intron in their ribosomal RNA,
as observed in about 40% of C. albicans strains and all C. stellatoide
a strains. This novel C. dubliniensis group I intron is identical to t
he C. albicans and C. stellatoidea intron, except for two widely diver
gent stem-loop regions. Despite these differences, the C. dubliniensis
intron possesses self-splicing ability in an in vitro assay. Taken to
gether, these data support the idea that C. albicans and C. stellatoid
ea should be joined together as variants of the same species while C.
dubliniensis is a distinct but closely related microorganism. To our k
nowledge, the C. albicans and C. dubliniensis introns are the first ex
ample of a pair of homologous group I introns differing only by the pr
esence of apparently facultative sequences in some stem-loops suspecte
d to be involved in stabilization of tertiary structure.