In a state of health the central nervous system is nearly devoid of ma
crophages, T and B cells, However, such cells are required to initiate
the inflammation associated with multiple sclerosis (MS), An importan
t issue in understanding the pathogenesis of such conditions is to ful
ly define the T and B cell specificities, Using random peptide librari
es, we have analysed the cerebrospinal fluid antibody specificities wi
thin one oligoclonal ''band'' from a patient with MS, The selected pep
tides from a 6-mer library revealed two peptide motifs S (S/T/Q) (R/S)
(N/G) FP and PRn (G/P) FF, Interestingly, the first motif,vas also se
lected from a 15-mer library, while the second motif was selected from
the 9-mer library, In addition, distinct but structurally related pep
tides to the mentioned moths were also selected, Surprisingly, a Swiss
Prot search with these moths revealed a significant linear homology wi
th collagen proteins, the 68 kDa neurofilament protein, versican and o
ther proteins from viruses such as herpes simplex virus, human cytomeg
alovirus and human papillomavirus, Thus, the observation that antibodi
es present within one oligoclonal immunoglobulin band could recognize
peptides, some that might be related by only the structure, raises the
question of the involvement of multiple pathogens in MS.